Welcome to EnteroBase

Your advanced tool for exploring the genomic epidemiology of pathogens.
EnteroBase assembles, analyses, and interprets bacterial genomes to provide insights for researchers, epidemiologists, and healthcare professionals.

EnteroBase currently contains 1,643,697 bacterial strains
senterica Image

Salmonella

Total strains: 748,738

Assemblies in progress: 86

Schemes: rMLST, Achtman 7 Gene MLST, cgMLST V2 + HierCC V1, wgMLST
ecoli Image

Escherichia/Shigella

Total strains: 431,262

Assemblies in progress: 20

Schemes: rMLST, wgMLST, Achtman 7 Gene MLST, cgMLST V1 + HierCC V1
mycobacterium Image

Mycobacterium tuberculosis

Total strains: 210,685

Schemes: cgMLST + HierCC, cgMLST V2 + HierCC
streptococcus Image

Streptococcus

Total strains: 168,276

Assemblies in progress: 14

Schemes: cgMLSTv1
clostridium Image

Clostridioides

Total strains: 33,347

Assemblies in progress: 0

Schemes: wgMLST, rMLST, cgMLST V1 + HierCC V1
vibrio Image

Vibrio

Total strains: 23,650

Assemblies in progress: 0

Schemes: rMLST, Vibrio cgMLST + HierCC
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Yersinia

Total strains: 12,472

Assemblies in progress: 1

Schemes: rMLST, wgMLST, Achtman 7 Gene, McNally 7 Gene, cgMLST V1 + HierCC V1
helicobacter Image

Helicobacter

Total strains: 12,455

Assemblies in progress: 0

Schemes: rMLST
mcatarrhalis Image

Moraxella

Total strains: 2,812

Assemblies in progress: 0

Schemes: rMLST, Achtman 7 Gene